Posts Tagged ‘Biology’
« Older Entries |Identifying the Microbial Culprit of The Black Plague
Tuesday, October 18, 2011
A microbial treasure box was just dug up and some insight was provided (via sequencing technologies) into The Black Plague
Tags: Bacteria, bioinformatics, Biology
Posted in Science in the Lay Press | No Comments »
Enzymatic networks
Monday, October 17, 2011
This group analyzes enzyme networks for robustness and dynamics.
Tags: bioinformatics, Biology, Current Literature, Network Science
Posted in Current Data Papers, Network Science | No Comments »
A network analysis approach to prediabetes
Friday, October 14, 2011
The molecular, cellular, and evironemental factors of diabetes makes for a complex problem that this group attacks using a network analysis approach.
Tags: bioinformatics, Biology, disease, Network Science
Posted in Current Data Papers, Network Science | No Comments »
Great book to add to the “to read” pile
Tuesday, October 4, 2011
Tags: Biology, Evolution, RNA
Posted in Science in the Lay Press | No Comments »
Krebs Cycle Funnery
Tuesday, September 20, 2011
Here’s an interesting take on the Krebs Cycle, and more importantly, learning the Krebs Cycle.
Tags: Biology, Network Science, tutorials, visual media
Posted in Science in the Lay Press, Teaching | No Comments »
TimeDelay-ARACNE: Reverse engineering of gene networks from time-course data by an information theoretic approach.
Thursday, September 15, 2011
The timecourse data sets are huge in systems biology. This paper details efforts to generate gene networks using microarray data. Time-course data used to create a gene network
Tags: bioinformatics, Biology, Network Science, software
Posted in Current Data Papers, Network Science | No Comments »
Protein networks in a plant model
Wednesday, September 14, 2011
Here’s a paper and press release for some recent work on the protein networks in Arabadopsis.
Tags: bioinformatics, Biology, Network Science, plants, proteins
Posted in Current Data Papers, Network Science | No Comments »
Rank-based edge reconstruction for scale-free genetic regulatory networks.
Tuesday, September 13, 2011
The construction of gene networks is tricky business and this group details a Rank-based edge method: Rank-based edge reconstruction
Tags: bioinformatics, Biology, Network Science, software
Posted in Current Data Papers, Network Science | No Comments »
Top 7 papers in Molecular Biology from F1000
Monday, September 12, 2011
Here are the top 7 papers in Molecular Biology ranked by F1000. Roger Tsien keeps hitting them out of the park. Cool stuff.
Tags: Biology, Current Literature, Scientific Method
Posted in Review Paper | No Comments »
Gene expression network reconstruction by convex feature selection when incorporating genetic perturbations.
Monday, September 12, 2011
Generating or constructing the network is one thing, but it’s very difficult to ensure the model is predictive in terms of perturbations. This paper details efforts on how to do just that: Perturbations on Genetic Networks
Tags: bioinformatics, Biology, Network Science, software
Posted in Current Data Papers, Lab Business | No Comments »